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Barba LA (2018) Terminologies for Reproducible Research. arXiv. arXix: arXiv:1802.03311.

Blischak JD, Davenport ER & Wilson G (2016) A Quick Introduction to Version Control with Git and GitHub. PLoS Computational Biology, 12, e1004668. DOI: 10.1371/journal.pcbi.1004668.

Braga PHP, Hébert K, Hudgins EJ, et al. (2023) Not Just for Programmers: How GitHub Can Accelerate Collaborative and Reproducible Research in Ecology and Evolution. Methods in Ecology and Evolution, 14, 1364-1380. DOI: 10.1111/2041-210x.14108.

Brousil MR, Filazzola A, Meyer MF, et al. (2023) Improving Ecological Data Science with Workflow Management Software, 14, 1381-1388. DOI: 10.1111/2041-210X.14113.

Bryan J (2017) Excuse Me, Do You Have a Moment to Talk About Version Control? PeerJ Preprints, 5, e3159v2. DOI: 10.7287/peerj.preprints.3159v2.

Lee BD (2018) Ten Simple Rules for Documenting Scientific Software. PLoS Computational Biology, 12, e1006561. DOI: 10.1371/journal.pcbi.1006561.

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Nüst D, Sochat V, Marwick Ben et al. (2020) Ten Simple Rules for Writing Dockerfiles for Reproducible Data Science. PLoS Computational Biology, 16, e1008316 DOI: 10.1371/journal.pcbi.1008316.

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Online books

Bryan J (2023) Happy Git and GitHub for the useR. URL:

Landau W (2023) The targets R package user manual. URL:

Wickham H (2019) Advanced R. URL:

Wickham H (2023) R for Data Science. URL:

Wickham H & Bryan J (2023) R Packages: Organize, Test, Document, and Share Your Code. URL:

Yihui X, Allaire JJ & Grolemund G (2023) R Markdown: The Definitive Guide. URL: