🎓 Practice 1 - Research Compendium

Structure of the research compendium of the practice 1 of the training course Reproducible Research in Computational Ecology.

Content

This repository is structured as follow:

  • data/: contains all raw data required to perform analyses

  • analyses/: contains R scripts to run each step of the workflow

  • R/: contains R functions developed especially for this project

  • DESCRIPTION: contains project metadata (author, date, dependencies, etc.)

  • make.R: main R script to run the entire project by calling each R script stored in the analyses/ folder

Usage

Fork and clone the repository, open R/RStudio and run:

source("make.R")

Notes

  • All required packages, listed in the DESCRIPTION file, will be installed (if necessary)
  • All required packages and R functions will be loaded

How to cite

Casajus N, Bonnici I, Dray S, Gimenez O, Guéry L, Guilhaumon F, Schiettekatte NMD & Siberchicot A (2023) Workshop FRB-CESAB & RT EcoStat: Reproducible Research in Computational Ecology. Zenodo. http://doi.org/10.5281/zenodo.4262978.